Repositories list

• cocomo

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•1•Updated Oct 16, 2024Oct 16, 2024

• Biotropica-Capuchin-Agouti

  Public
  R

  •0•0•0•0•Updated Oct 8, 2024Oct 8, 2024

• Animal-IMU-Peak-Finder

  Public
  An R function to identify local peaks (maxima) and troughs (negative peaks) in motion sensor data. Supports customizable height thresholds, baseline subtraction, marked event filtering, and optional visualization of the detected peaks.

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 5, 2024Oct 5, 2024

• Movement-Verified-GPS-Filtering-Protocol

  Public
  R script and example dataset to implement the Movement Verified Filtering (MVF) Protocol, designed to classify genuine movement in animals from high-resolution GPS and motion sensor data [DOI:https://doi.org/10.1098/rsif.2021.0692].

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• Calculating-Animal-Heading

  Public
  An R function for tilt-compensated compass computation using accelerometer and magnetometer data. Supports soft/hard iron calibration, quaternion-based orientation calculations, tag rotation correction, and outputs body orientation angles (pitch, roll, yaw/heading).

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• Animal-Dead-Reckoning-In-R

  Public
  Gundog.Tracks: An R script for Dead-Reckoning Animal Movement with optional Verified Position Correction.

  R

  •

  MIT License

  •0•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• E-Obs-Schedule-Optimizer

  Public
  Shiny app for configuring E-Obs GPS/IMU schedules, estimating battery life and memory usage, and setting delayed start times.

  R

  •

  MIT License

  •1•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• denningersnyder_tza_wildlife_conflict_code

  Public
  HW Conflict Data around Reserves

  TeX

  •1•0•0•0•Updated Sep 30, 2024Sep 30, 2024

• dipteryx_sampling_sims

  Public
  R

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Sep 23, 2024Sep 23, 2024

• animal2vec

  Public
  animal2vec: A self-supervised transformer for rare-event raw audio input

  deep-learningtransformerbioacoustics

  Python

  •

  MIT License

  •0•14•0•0•Updated Jul 26, 2024Jul 26, 2024

• EAS

  Public archive
  Ecology of Animal Societies - GitHub Mainpage

  HTML

  •0•1•0•0•Updated Jul 16, 2024Jul 16, 2024

• methods_support_repository

  Public archive
  Archived documentation of a program that ran 2021-2022 to offer methods support to members of MPI AB EAS Dept.

  HTML

  •0•0•0•0•Updated Jul 16, 2024Jul 16, 2024

• eas-coding-workshops

  Public
  R

  •0•1•0•1•Updated Jul 15, 2024Jul 15, 2024

• telephone2024

  Public
  Playground for git workshop 2024-04-16.

  R

  •

  Other

  •0•0•0•1•Updated Apr 17, 2024Apr 17, 2024

• data_catalog_entry_form_shiny_yml

  Public archive
  R

  •0•1•0•1•Updated Mar 4, 2024Mar 4, 2024

• montgomery_hyena_mobbing

  Public
  Data and code associated with manuscript "Determinants of hyena participation in risky collective action" doi: 10.1098/rspb.2023.1390

  R

  •2•0•0•0•Updated Nov 12, 2023Nov 12, 2023

• jacobson_CH1_Sampling

  Public
  odd chapter 1 ijp sampling paper

  1•0•0•0•Updated Oct 13, 2023Oct 13, 2023

• planet

  Public
  0•0•0•0•Updated Oct 13, 2023Oct 13, 2023

• fieldDataProcessing

  Public
  R

  •0•0•0•0•Updated Sep 6, 2023Sep 6, 2023

• pminasandra_hyena-acc

  Public
  Code for "Accelerometer-based predictions of behaviour elucidate factors affecting the daily activity patterns of spotted hyenas"

  Python

  •

  GNU Affero General Public License v3.0

  •1•0•0•0•Updated Sep 6, 2023Sep 6, 2023

• goldsborough_tooltides

  Public
  Data and code for project on tool use and tidal cycles in white-faced capuchins

  R

  •1•0•0•0•Updated Jul 10, 2023Jul 10, 2023

• strauss2023_inheritance

  Public
  R

  •2•0•0•0•Updated Mar 7, 2023Mar 7, 2023

• barrett_multinomial_freq_beyond_two

  Public
  Repo for paper and multinomial puzzlebox sim paper

  R

  •1•0•0•0•Updated Oct 7, 2022Oct 7, 2022

• averly_Meerkat_TurnSpeed_Influence

  Public
  Code from Averly et al. 2022 "Disentangling influence over group speed and direction reveals multiple patterns of influence in moving meerkat groups"

  R

  •2•0•0•0•Updated Jul 27, 2022Jul 27, 2022

• project_metadata

  Public
  2•0•1•0•Updated Dec 6, 2021Dec 6, 2021

• project_management_and_logistics

  Public
  Resources for project management to look at before fieldwork

  2•0•0•0•Updated Nov 23, 2021Nov 23, 2021

• resource_and_tutorials

  Public
  A list of resources and tutorial for open data science and reproducibility

  0•0•0•0•Updated Oct 12, 2021Oct 12, 2021

• collaborative_agreement

  Public
  This Colaborative Research Agreement (CRA) is meant to be an optional, internal, semi-formal agreement that can provide guidance, structure, and accountability to the members of a collaboration.

  HTML

  •1•0•0•0•Updated May 17, 2021May 17, 2021

• hashing_digest_tutorial

  Public
  2•0•0•0•Updated May 7, 2021May 7, 2021

• canteloup_vervet_peanut_EWA

  Public
  R

  •1•0•0•0•Updated Feb 24, 2021Feb 24, 2021