Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

A variety of improvements around tool parameter modeling (second try) #19027

Open
wants to merge 12 commits into
base: dev
Choose a base branch
from
Open

A variety of improvements around tool parameter modeling (second try) #19027

wants to merge 12 commits into from

Commits on Oct 17, 2024

  1. tool input format test fixutre

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    4ae079a View commit details
    Browse the repository at this point in the history

  2. More tool tests.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    64c9832 View commit details
    Browse the repository at this point in the history

  3. Refactor Tool._populate for reuse of hook checks.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    b9d5228 View commit details
    Browse the repository at this point in the history

  4. Spelling error.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    8a3dde7 View commit details
    Browse the repository at this point in the history

  5. Refactor for reuse in galaxy.tool_util.parameters.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    a8727e2 View commit details
    Browse the repository at this point in the history

  6. Refactor encode/decode for reuse.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    0ebabc6 View commit details
    Browse the repository at this point in the history

  7. Use get_color_value in basic.py.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    3e3664f View commit details
    Browse the repository at this point in the history

  8. models for tool landing request state...

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    d96ea1c View commit details
    Browse the repository at this point in the history

  9. Pydantic models for parameter validators.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    b11b7d4 View commit details
    Browse the repository at this point in the history

  10. Fix param models for dynamic options and truevalue/falsevalue

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    2ddc437 View commit details
    Browse the repository at this point in the history

  11. Update tool shed schema for parameter model changes.

    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    9b3cd3e View commit details
    Browse the repository at this point in the history

  12. Cleanup stock tool sources parsed in galaxy.tools.stock. 

    Was causing a randomly failing test.
    @jmchilton
    jmchilton committed Oct 17, 2024
    Configuration menu
    Copy the full SHA
    0a01326 View commit details
    Browse the repository at this point in the history